Tag Archives: evolution

Was Lamarck right along? Why evolution doesn’t work like we thought it did

I expect most Futurismic regulars, much like myself, think they understand the basics of Darwin’s theory of evolution: random mutations occur in each generation, natural selection culls the poor adaptations, repeat and rinse ad infinitum, and the life a creature lives doesn’t affects its genetic legacy.

Well, here’s the thing: it turns out that the last point there – one which I’ll freely admit to having pedantically called people out on for years – may well not be true at all [via Kate Feld]:

… we’ve come to understand that the awesome power of natural selection – frequently referred to as the best idea in the history of science – lies in the sheer elegance of the way such simple principles have generated the unbelievable complexities of life. From two elementary notions – random mutation, and the filtering power of the environment – have emerged, over millennia, such marvels as eyes, the wings of birds and the human brain.Yet epigenetics suggests this isn’t the whole story. If what happens to you during your lifetime – living in a stress-inducing henhouse, say, or overeating in northern Sweden – can affect how your genes express themselves in future generations, the absolutely simple version of natural selection begins to look questionable. Rather than genes simply “offering up” a random smorgasbord of traits in each new generation, which then either prove suited or unsuited to the environment, it seems that the environment plays a role in creating those traits in future generations, if only in a short-term and reversible way.

[…]

Epigenetics is the most vivid reason why the popular understanding of evolution might need revising, but it’s not the only one. We’ve learned that huge proportions of the human genome consist of viruses, or virus-like materials, raising the notion that they got there through infection – meaning that natural selection acts not just on random mutations, but on new stuff that’s introduced from elsewhere. Relatedly, there is growing evidence, at the level of microbes, of genes being transferred not just vertically, from ancestors to parents to offspring, but also horizontally, between organisms.

[…]

Among the arsenal of studies at Shenk’s disposal is one published last year in the Journal of Neuroscience, involving mice bred to possess genetically inherited memory problems. As small recompense for having been bred to be scatterbrained, they were kept in an environment full of stimulating mouse fun: plenty of toys, exercise and attention. Key aspects of their memory skills were shown to improve, and crucially so did those of their offspring, even though the offspring had never experienced the stimulating environment, even as foetuses.

“If a geneticist had suggested as recently as the 1990s that a 12-year-old kid could improve the intellectual nimbleness of his or her future children by studying harder now,” writes Shenk, “that scientist would have been laughed right out of the hall.” Not so now.

And cue selective quote-mining by adherents of Creationism and other theologically-compromised pseudosciences in three, two, one…

Will Gillis on sf’s changing face

I don’t know whether William Gillis wrote this little screed about the changing face of science fiction as a response or reaction to Jo Walton’s piece about the reading protocols of the genre, but it certainly serves as an interesting counterpoint to it. I like to read the viewpoints of smart readers coming from outside the loose tribe of fandom, because it enables us to see some of the stories we tell ourselves about the genre’s evolution in a different light:

… the modern age has given rise to a very distinguishable modern clique of SF authors interested in worlds with recognizable causal connections to our world. In a world deprived of anything more than an anemic NASA how we get there matters (or, alternatively, how it diverged). The other hallmark of the internet age is the density of the snarkiness, reference and speed of ideas — if Blade Runner signified the beginning of the shift away from abstraction with advertisements referencing real corporations, today’s authors plaster their prose with injokes. Rather than trying to abstract away, they embrace our inherent ties to the world as it is in order to milk a higher density out of our shared language. The internet has given everyone the sensation of having passing knowledge in every field, and modern SF authors are expected to be versed and deliver on many if not all fronts.

There simply isn’t the patience for limited-focus authors. And while I still heart Delany and Le Guin, I think this is a good thing. Nothing’s worse than sitting through a work full of intellectual spark on one front to find it dead on another. A great mathematics twist matched with a ridiculous carbon copy of the author’s culture transposed upon a ridiculously different environment. A finely constructed anthropological or psychological thesis with cliche and implausibly-portrayed tech.

Perhaps Gillis has hit upon the reason that the enthroned classics of the genre frequently fail to move new readers in the way they moved us when we discovered them… but having typed that out, it feels like a tautology. How about you – did the sf classics from before your time hold up to their reputations, or were they interesting in the way that archaeology is interesting?

The uncanny evolution of Moscow’s stray dogs

Staying in the Russian capital for another post, here’s a fascinating article at the Financial Times about Moscow’s legendary population of stray dogs, and about the man who has been studying them [via MetaFilter; image by Adam Baker].

Muscovites have a close relationship with dogs, and the city is home to thousands of strays – more than eighty per square mile. And they’re not strays in the sense that we tend to think of them, namely abandoned pets; Moscow’s urban ecosystem has had a thriving population of dogs for long enough that a fully-domesticated animal released into the scrum of the streets would be unlikely to last more than a few days.

Furthermore, the population is big enough that it can be used to observe evolution in action; Andrei Poyarkov, a biologist specialising in wolves, has been studying Moscow’s canine tribes and learning about their gradual shift back toward a wilder nature, and about how the urban environment provides pressures that select for intelligence over aggression – to the extent that some of the dogs have actually learned to ride the subway system in search of reliable human benefactors to scrounge from:

“The second difference between stray dogs and wolves is that the dogs, on average, are much less aggressive and a good deal more tolerant of one another,” says Poyarkov. Wolves stay strictly within their own pack, even if they share a territory with another. A pack of dogs, however, can hold a dominant position over other packs and their leader will often “patrol” the other packs by moving in and out of them. His observations have led Poyarkov to conclude that this leader is not necessarily the strongest or most dominant dog, but the most intelligent – and is acknowledged as such. The pack depends on him for its survival.

Amazing how life finds ways of colonising and thriving in the interstitial spaces of the human world, isn’t it?

Stoned neural networks, wet computers and audio Darwinsim

Here’s a handful of links from the weird and wonderful world of computer science…

First of all, Telepathic-critterdrug is described as “a controversial fork of the open source artificial-life sim Critterding, a physics sandbox where blocky creatures evolve neural nets in a survival contest. What we’ve done is to give these animals an extra retina which is shared with the whole population. It’s extended through time like a movie and they can write to it for communication or pleasure. Since this introduces the possibility of the creation of art, we decided to give them a selection of narcotics, stimulants and psychedelics. This is not in Critterding. The end result is a high-color cellular automaton running on a substrate that thinks and evolves, and may actually produce hallucinations in the user.

You can download your own copy of this bizarre experiment to play with. Quite what it’s supposed to achieve (other than entertaining its creators) I’m not entirely sure… but then again, that’s what we tend to think about the reality we inhabit, so maybe there’s some sort of simulation-theory microcosm metaphor that could be applied here, eh?

Next up, wetware is about to make the transition from science fictional neologism to genuine branch of technological research; boffins at the University of Southampton are hosting an international collaboration aimed at making a chemical computer based on biological principles [via SlashDot].

The goal is not to make a better computer than conventional ones, said project collaborator Klaus-Peter Zauner […] but rather to be able to compute in new environments.

“The type of wet information technology we are working towards will not find its near-term application in running business software,” Dr Zauner told BBC News.

“But it will open up application domains where current IT does not offer any solutions – controlling molecular robots, fine-grained control of chemical assembly, and intelligent drugs that process the chemical signals of the human body and act according to the local biochemical state of the cell.

And last but not least, DarwinTunes is an experiment by two ICL professors to see whether they can use genetic algorithms to “evolve” enjoyable music from chaos, using the feedback of human listeners [via MetaFilter]. The DarwinTunes project website is sadly lacking a page that explains the project in a nutshell (or at least one that’s easily located by a first-time visitor), but a bit of poking around in the early blog entries should reveal the details. Or you can just listen to their 500th-generation riffs and loops from the project, which is still running.

What Are The Animals Becoming?

Since I went for things made of metal skins and electrical guts last month when I wrote about weird robots, I decided to opt for warm-blooded carbon-based life forms this time around – so welcome to the December column on smart animals!

Now, we’re a dog family, and we have a golden retriever and two border collies.  My partner just bought a puzzle for the dogs. It’s a wooden base with cups for treats, and sliding doors that move and hide the treats.  The object is for the dog to slide the doors out of the way and get the treats inside.  One of the stated purposes of the toy is to increase animal intelligence.  Mind you, if the border collies get much smarter we’re in trouble.  The golden?  Well, that’s another story. Continue reading What Are The Animals Becoming?